MASLD META NETWORK
Top-Score
Process-Gene
STRING
Stage-Dependent Network
Sex-Aware Network
Transcriptome Browser
Histological Scoring System:
NAFLD Activity Score
Fibrosis Stage
Include Analysis With:
All Genes
Only Upregulated
Only Downregulated
Select Category:
C2
C3
C4
C5
C6
C7
C8
H
Minimum -log10(q-value):
Cut network by:
Shared Genes
Jaccard Index
Minimum Jaccard index between pathways:
Minimum number of shared genes between pathways:
Clustering Method:
No Clustering
Louvain
Edge Betweenness
Label Propagation
Rename Clusters
Use Paper Settings
Keep only connected nodes
Enable network motion
Download Summary Table (XLSX)
Download Network as HTML
Minimum -log10(q-value):
Select Centrality Method:
Degree
Closeness
Betweenness
PageRank
Weight for total score:
Show genes with combined score above:
Choose a CSV or TXT file
Browse...
Enable network motion
Back to Full Network
Download Summary Table (XLSX)
Download Network as HTML
Histological Scoring System:
NAFLD Activity Score
Fibrosis Stage
Include:
All
Only Upregulated
Only Downregulated
STRING Combined Score
Meta Analysis Score
Select Centrality Method:
Degree
Closeness
Betweenness
PageRank
Weight for total score:
Show genes with combined score above:
Choose a CSV or TXT file
Browse...
Clustering Method:
No Clustering
Louvain
Edge Betweenness
Label Propagation
Enable network motion
Advanced filters ▼
Neighborhood
Fusion
Cooccurance
Coexpression
Experimental
Database
Text Mining
Download Summary Table (XLSX)
Download Network as HTML
Histological Scoring System:
NAFLD Activity Score
Fibrosis Stage
Include Analysis With:
All Genes
Only Upregulated
Only Downregulated
Select Category:
C2
C3
C4
C5
C6
C7
C8
H
Choose NAS Group (Against NAS Group 0):
Choose Stage (Against Fibrosis Stages F0+F1):
Minimum -log10(q-value):
Cut network by:
Shared Genes
Jaccard Index
Minimum Jaccard index between pathways:
Minimum number of shared genes between pathways:
Clustering Method:
No Clustering
Louvain
Edge Betweenness
Label Propagation
Rename Clusters
Keep only connected nodes
Enable network motion
Show lost nodes of this stage
Download Summary Table (XLSX)
Download Network as HTML
Histological Scoring System:
NAFLD Activity Score
Fibrosis Stage
Include Analysis With:
All Genes
Only Upregulated
Only Downregulated
Select Category:
C2
C3
C4
C5
C6
C7
C8
Select Category:
C2
C3
C4
C5
C6
C7
C8
H
Minimum -log10(q-value):
Cut network by:
Shared Genes
Jaccard Index
Minimum Jaccard index between pathways:
Minimum number of shared genes between pathways:
Clustering Method:
No Clustering
Louvain
Edge Betweenness
Label Propagation
Rename Clusters
Keep only connected nodes
Enable network motion
Download Summary Table (XLSX)
Download Network as HTML
Histological Scoring System:
NAFLD Activity Score
Fibrosis Stage
Select Gene:
Upload gene list to create dotplot (.txt)
Browse...
General Results
Tip:
Click on any section title below to expand or collapse its results.
Regression Results
DGEA Results
Gene Disease Patterns Results
Gene List Dotplot
Clustered Gene List Heatmap